Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952105.1_cds_XP_016491923.1_82190
CDS Infomation

[gene=LOC107811493] [db_xref=GeneID:107811493] [protein=probable ubiquitin-conjugating enzyme E2 24] [protein_id=XP_016491923.1] [location=join(44679..46118,46537..46674,46940..47371,47470..47533,48527..48666,48942..49253,49469..49705)] [gbkey=CDS]
Sequence

ATGGATACATCTTCTCTAAGTGACTTTGATAGTTTCAGCGAGAGCAGCAGTTATGACGAT
CAGGATTATGTTGAATATCTGTATGGTGGGCATGCCTGTTCTATTCTTTCAAGTCTTGAG
GAGAGCATCGGTAAAATCGACGACTTTCTCTCCTTTGAGAGAGTGTTTATGTATGGGGAC
ATAGTATGCGCAGTAAATGACCCATCCGGACAGATGGGAAAAGTGATCAATGTTGAGATG
ATTGTTGACTTGGAAAATATTTATGGAAGCAAGATGCAAGATGTTAACTCAAAAGATCTG
GTGAAAATACGTCCAATTTCTGTTGGGGATTATGTAGTGATGGGCCCATGGCTTGGGAAA
GTGGAAAAGATAGTCGATAAAGTTAAAGTCCTCTTTGATGATGGTGCAAAGTCTGAGTTT
GCAGCCGAGGGTTCAGAAATTCTCACACCAATTTCCCCTGATTTAGTTGAAGACCCACAA
TATCCTTTCTACCCGGGACAAAGGGTTCAAGTTCAGTCTGTAGCTGCCTCTGGATCAACC
AACTGGTTATGTGGTGTAAAAAGTGGCAAAAGAGAGCAAGGTACCATTTGTGCTGTGGAG
GCTGGAGTCATGTATGTAGATTGGATCGGCTGTGGCAGTCTTGGTTGTGAAGAGGTGCCT
AGTCCCCCGAATCTTCAGGACTCAGAAAAGTTAACCTTGTTATCTTGCTTCTCCCATGCA
AAGTGGCAGCTTGGAGATTGCTGTCTACTTCCAGTTGCTGACTCTAAGAACTTTCTGCAG
CAGAATATTCAATGCTCACCTCCCTATGGAGCAATGAAAGAGAACAGGCAGCTAAATAAG
GCATCTCAGAGTAATAGGAGCTCAACTGTTCCGCAAGTTGCTGTAATTTCAAGAACAAGG
ACAAAAGTTGATGTTTCGTGGCAGGATGGAAGCGTGACTACTGGATTGGACTCAGATTCT
GTATTTCCTGTCAATATTGTGGATGCTCATGAGTTTTGGCCAGAGCAGTTCGTGCTTGAT
AAGGGATCCTGTGATGACTCGTCTGTTCCCAGTCCAAAAAGGTGGGGCGTGGTGAGGTGT
GTTGATGCGAAGGAGCGAACTGTAAAGGTAAAATGGACAACTTTTTCCTTGAATGAACCA
AATAAGTTTAGGGTAGAGCAAACTGAAGAAATTGTGAGTGCATATGAACTGATGGACCAT
CCAGACTACTCATACTGTTTCGGTGATGCGGTTTGCAAGTTTTGTGAGGATCAGGTTTTC
AGTCTTGATGGAAAAAGCATGTTCTCTGAGATGGACATTAACTCCAAGCTGAAGAATATT
GATAAAAGAAAGGATAATTCAGATTTCACCGGATATGATCACTTGTCTTGCATTGGTATT
ATTGTTGGCTTCAAAGATGGCAATATTGAAGTGAAATGGGCTACTGGTATTACAAGCACG
GTAGCACCCTTTGAGATCTATCGGATAGGTAAGTGTGAAGCTGCTGCTGCCATTACAGTG
CCCTCTGGTGAAAATGCTGAGCCATCAGGTGCGGAGATGAGTTCAGAGGAAAATCAACTT
TCAAAACCTGAGGAAAAGGACTTGCTGAAGTTTGGTGGCGATAGTGAAAGTTGCAACAGG
AGTTTGTGGAATTCTAGTTCCTGTTTGCTTTCTCAAGCTGCTATTGGCTTTTTCTCGAGT
ATCACCTCTCGTCTTTTCGGCTCCTTGAGCACATCACTGTTTGGTACATACCAAGCTATA
TCAGAAGGACAGGAATCAAGGATTCTAAATGAGGAGGAAGTCATAGAACTTAGCAATTTG
AATGCAGGAATTCTCACACTTGAGGTAGGATACATGAAGGCTTCCCTTGAAATGGAACTA
GAGCAAGAACAGGAAACAGCTGAGGATCAAAAACATGATGCTTTGCCATCTTCCAGCAAG
CTCCCTGAAGAGTTTAGACAGTTTGATATGGTAACTGGTTTCTCAGACCACCATTTTGCA
GATGGTGCTGGAAAGGCGCAGTTATCCCAGGTTAGAAGAGGTTGGCTGAAGAAGGTCCAA
CAAGAATGGAGCATTTTGGAACATGATCTTCCTGAGACTATCTATGTACGCGTATATGAA
GAAAGAATGGATTTGCTGCGAGCAGCCATTATTGGTGCACCTGGGACTCCGTATCATGAT
GGACTCTTCTTCTTTGATATTTACCTACCTTCGGACTATCCGCATGAGCCACCTATGGTC
TACTATCACTCTAGCGGGCTTCGTGTCAATCCCAACTTGTATGAGTCAGGAAAGGTCTGT
CTTAGTCTCTTAAATACATGGACGGGCTCCGGAAATGAAGTATGGAACCCCAAAAGTTCC
ACGATTCTACAAGTTCTCCTCTCTCTTCAAGCACTTGTGCTCAATGAAAAGCCTTATTTC
AATGAGGCTGGATATGATGCACAGATTGGAAAAGCTGATGGTGAAAAGAACTCAGCTAGC
TATAATGAAAATGCTTTCCTTGTTACCTGCAAGTCCATGTTATACCAACTCAACAAGCCA
CCTAAGCATTTTGAAGCACTCGTGCAAGAGCACTTTGGTAAAAGATGGAAGCACATTTTG
TTGGCTTGTAAGGCGTACATGGACGGTGCACCAGTTGGTTCTGCATTTCAACCCAAAAGT
CAGGAGCAAGAACCGATAAAAGGAAGCTCTACAGGGTTCAAGATTATGCTTGGCAAGCTT
TTCCCTAAACTCGTGGCGGCATTCACTGACAAAGGTATCGATTGCAGTCAGTTGTCCGAT
TAA

Peptide Sequence

PEP ID

XP_016491923.1
PEP Infomation

PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Nicotiana tabacum]
Sequence

MDTSSLSDFDSFSESSSYDDQDYVEYLYGGHACSILSSLEESIGKIDDFLSFERVFMYGD
IVCAVNDPSGQMGKVINVEMIVDLENIYGSKMQDVNSKDLVKIRPISVGDYVVMGPWLGK
VEKIVDKVKVLFDDGAKSEFAAEGSEILTPISPDLVEDPQYPFYPGQRVQVQSVAASGST
NWLCGVKSGKREQGTICAVEAGVMYVDWIGCGSLGCEEVPSPPNLQDSEKLTLLSCFSHA
KWQLGDCCLLPVADSKNFLQQNIQCSPPYGAMKENRQLNKASQSNRSSTVPQVAVISRTR
TKVDVSWQDGSVTTGLDSDSVFPVNIVDAHEFWPEQFVLDKGSCDDSSVPSPKRWGVVRC
VDAKERTVKVKWTTFSLNEPNKFRVEQTEEIVSAYELMDHPDYSYCFGDAVCKFCEDQVF
SLDGKSMFSEMDINSKLKNIDKRKDNSDFTGYDHLSCIGIIVGFKDGNIEVKWATGITST
VAPFEIYRIGKCEAAAAITVPSGENAEPSGAEMSSEENQLSKPEEKDLLKFGGDSESCNR
SLWNSSSCLLSQAAIGFFSSITSRLFGSLSTSLFGTYQAISEGQESRILNEEEVIELSNL
NAGILTLEVGYMKASLEMELEQEQETAEDQKHDALPSSSKLPEEFRQFDMVTGFSDHHFA
DGAGKAQLSQVRRGWLKKVQQEWSILEHDLPETIYVRVYEERMDLLRAAIIGAPGTPYHD
GLFFFDIYLPSDYPHEPPMVYYHSSGLRVNPNLYESGKVCLSLLNTWTGSGNEVWNPKSS
TILQVLLSLQALVLNEKPYFNEAGYDAQIGKADGEKNSASYNENAFLVTCKSMLYQLNKP
PKHFEALVQEHFGKRWKHILLACKAYMDGAPVGSAFQPKSQEQEPIKGSSTGFKIMLGKL
FPKLVAAFTDKGIDCSQLSD

Transcript Sequence

Gene sequence data has not been registered.